All modules for which code is available

• pytadbit
• pytadbit.alignment
• pytadbit.boundary_aligner.aligner
• pytadbit.boundary_aligner.globally
• pytadbit.boundary_aligner.locally
• pytadbit.boundary_aligner.reciprocally
• pytadbit.chromosome
• pytadbit.experiment
• pytadbit.hic_data
• pytadbit.mapping
• pytadbit.mapping.analyze
• pytadbit.mapping.filter
• pytadbit.mapping.full_mapper
• pytadbit.mapping.restriction_enzymes
• pytadbit.modelling.impmodel
• pytadbit.modelling.structuralmodels
• pytadbit.parsers.genome_parser
• pytadbit.parsers.hic_parser
• pytadbit.parsers.sam_parser
• pytadbit.parsers.tad_parser
• pytadbit.tad_clustering.tad_cmo
• pytadbit.tadbit
• pytadbit.utils.extraviews
• pytadbit.utils.fastq_utils
• pytadbit.utils.file_handling
• pytadbit.utils.hic_filtering
• pytadbit.utils.tadmaths
• pytadbit.utils.three_dim_stats